| PathBank v1.0 |
Total Number of Metabolites (non-redundant) | 78488 |
Total Number of Proteins (non-redundant) | 8993 |
Total Number of Enzymes (non-redundant) | 6268 |
Total Number of Transporters (non-redundant) | 710 |
Total Number of Reactions (non-redundant) | 176535 |
Total Number of Transportations (non-redundant) | 9859 |
Total Number of Reaction-Coupled Transportations (non-redundant) | 342 |
Total Number of Interactions (non-redundant) | 2346 |
Total Number of References (non-redundant) | 12958 |
| PathBacK 1.0 | KEGG | PAMDB | ECMDB | BioCyc | Reactome | BioCarta |
Number of Organisms | 10 | 10 | 6076 | 16 | 31 | 2 | 2 |
Number of Pathways | 109,836 | 605,359 | 653,007 | 20,882 | 2785 | 590 | 2 |
Average Number Pathways/Organism | 10,984 | 60,5359 | 107 | 1305 | 90 | 295 | 2 |
Has Operon Pathways | Yes | Yes | Yes | Yes | Yes | Yes | 2 |
Has Metabolic Pathways | Yes | Yes | Yes | Yes | Yes | No | 2 |
Number of Pathways (Escherichia coli) | 1134 | 1156 | 119 | 0 | 12 | 0 |
Number of Pathways (Pseudomonas aeruginosa) | 1134 | 1156 | 119 | 0 | 12 | 0 |
Hyperlinked Proteins/Genes | Yes | Yes | Yes | Yes | Yes | No |
Hyperlinked Metabolites | Yes | Yes | Yes | Yes | Yes | No |
Number of Signaling Pathways | 64 | 66 | 65 | 718 | 211 | 39 |
Compound Descriptions | Yes | Yes | No | No | No | No |
Protein Descriptions | Yes | Yes | No | No | No | No |
Pathway Summaries | Yes | Yes | Yes | Yes | Yes | No |
Average Word Count per Summary | 342 | 213 | 68 | 179 | 143 | 0 |
Average Reference Count per Pathway | 12 | 3 | 14 | 3 | 8 | 0 |
Rich Visual Display | Yes | Yes | No | Yes | No | Yes |
Displays Protein 4° Structure | Yes | Yes | No | Yes | No | No |
Deisplays Metabolite Structure | Yes | Yes | Yes | Yes | No | No |
Displays Cellular Organelles | Yes | Yes | No | Yes | Yes | Yes |
Displays Cellular Locations | Yes | Yes | No | Yes | Yes | Yes |
Multicolored Pathways | Yes | Yes | No | Yes | Yes | Yes |
Multiple Pathway Views | Yes | Yes | No | No | No | No |
Number of Pathway Image Formats | 2 | 2 | 1 | 6 | 7 | 1 |
XML Compatible | Yes | Yes | KGML | Yes | Yes | No |
SBML Compatible | Yes | Yes | No | Yes | Yes | No |
BioPAX Compatible | Yes | Yes | No | Yes | Yes | No |
'Google Maps' Interactivity | Yes | Yes | No | Yes | No | No |
Community Editable | Yes | Yes | No | No | Yes | No |
Open Access/Free Download | Yes | Yes | No | Yes | Yes | Yes |
Integrated with Other Apps | Yes | Yes | Yes | Yes | Yes | No |