Downloads
| Category | Description | File |
|---|---|---|
| Pathway Enzyme Sequences (in FASTA Format) |
Protein Sequences | Download |
| Pathway Map Component Structures (in SDF Format) |
Metabolite Structures | Download |
| Data Files | Metabolite names linked to PathBank pathways (includes KEGG and ChEBI IDs) | Download |
| Protein names linked to PathBank pathways (includes UniProt IDs) | Download | |
| Pathways linked to the reference material (in Textile Format) used to build the pathway | Download |
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| Category | Description | Download Link | Contents | Generated On |
|---|---|---|---|---|
|
Data Files
(Primary pathways only Contact us for all) |
PathBacK pathways CSV (subjects and descriptions) | Download | 173 KB | 1 file listing all pathways | Aug 07 2025 |
| Metabolite names linked to PathBacK pathways CSV (includes KEGG and ChEBI IDs) | Download | 1.01 MB | 1 file listing all metabolite-pathway links | Aug 07 2025 | |
| Protein names linked to PathBacK pathways CSV (includes UniProt IDs) | Download | 99.2 KB | 1 file listing all protein-pathway links | Aug 07 2025 | |
| BioPAX files | Download | 8.09 MB | 990 BioPAX files | Aug 07 2025 | |
| SBGN files | Download | 5.29 MB | 990 SBGN files | Aug 07 2025 | |
| SBML files | Download | 10.6 MB | 990 SBML files | Aug 07 2025 | |
| PWML files | Download | 48.1 MB | 989 PWML files | Aug 07 2025 | |
| Images | SVG files | Download | 196 MB | 1035 SVG images | Aug 07 2025 |
| PNG files | Download | 1.15 GB | 1035 PNG images | Aug 07 2025 | |
|
Sequences
(in FASTA Format) |
Protein Sequences | Download | 1.53 GB | 1 file combining sequences from all species | Aug 07 2025 |
| Gene Sequences | N/A | in progress... |